Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1774

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1773: 10141 - Hypothetical Protein, at 171350 to 172928 10141 mRNA_1774: 10142 - Hypothetical Protein, at 173181 to 173906 10142 mRNA_1775: 10143 - KOG1289 Amino acid transporters, at 174192 to 176320 10143

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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172,295 + 10141 mRNA_1773 0.60 0.4
172,304 - 10141 mRNA_1773 0.60 1.5
172,430 + 10141 mRNA_1773 0.68 1.1
172,798 + 1.6
172,878 - -0.7
172,916 - 0.7
172,933 + 0.6
173,158 - 2.3
173,224 + 0.4
173,309 - 10142 mRNA_1774 0.18 -1.1
173,366 + 10142 mRNA_1774 0.25 0.2
173,398 + 10142 mRNA_1774 0.30 0.5
173,504 + 10142 mRNA_1774 0.44 -0.9
173,512 + 10142 mRNA_1774 0.46 0.3
173,596 + 10142 mRNA_1774 0.57 1.0
173,634 + 10142 mRNA_1774 0.62 -0.4
173,650 + 10142 mRNA_1774 0.65 0.6
173,899 - -0.7
173,986 + 0.1
174,073 - 0.8
174,104 - -0.3
174,126 + -0.2
174,238 + -0.9
174,377 + 1.7
174,562 - 10143 mRNA_1775 0.17 -0.3
174,565 + 10143 mRNA_1775 0.18 0.6