Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1766

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1766: 10134 - K03097 CSNK2A casein kinase II subunit alpha, at 151982 to 154408 10134 mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154773 to 156142 10135

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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151,019 - 0.1
151,027 - -0.4
151,035 + -0.7
151,129 + -0.6
151,146 + 0.4
151,157 + -2.3
151,163 + 0.4
151,168 + -0.4
151,545 + 1.7
151,566 + -1.1
151,566 - 0.3
151,595 + -0.4
151,748 + -0.1
151,749 - -1.2
151,896 + 1.1
151,907 + 0.1
151,912 + 0.5
152,169 - -0.9
152,183 - -0.2
152,200 + 0.3
152,767 + 10134 mRNA_1766 0.32 0.6
152,782 - 10134 mRNA_1766 0.33 0.5
153,058 - 10134 mRNA_1766 0.44 0.6
153,247 - 10134 mRNA_1766 0.52 1.5
153,254 + 10134 mRNA_1766 0.52 0.2
153,351 + 10134 mRNA_1766 0.56 1.3
153,649 - 10134 mRNA_1766 0.69 1.2
153,823 + 10134 mRNA_1766 0.76 0.6
153,876 + 10134 mRNA_1766 0.78 0.3
153,942 + 10134 mRNA_1766 0.81 0.1
154,279 - 1.9
154,316 + 0.0
154,510 + 0.1
154,553 - 0.3
154,553 - 0.3
154,553 - 1.7
154,634 + -0.2
154,640 + 0.9
154,676 - 0.4
154,984 - 10135 mRNA_1767 0.15 1.8
155,128 - 10135 mRNA_1767 0.26 0.8