Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1754

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1753: 10121 - BLAST ubiquitin ligase SCF complex subunit Cullin [Rhizocto..., at 119508 to 121647 10121 mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121684 to 123500 10122 mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123629 to 124708 10123

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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120,725 - 10121 mRNA_1753 0.57 0.7
120,809 + 10121 mRNA_1753 0.61 -0.6
120,922 - 10121 mRNA_1753 0.66 1.6
121,244 + 10121 mRNA_1753 0.81 0.0
121,444 - 1.5
121,599 - 0.9
121,731 - 0.2
121,748 - -1.1
121,884 + 10122 mRNA_1754 0.11 0.4
122,037 - 10122 mRNA_1754 0.19 -0.1
122,054 + 10122 mRNA_1754 0.20 1.7
122,152 - 10122 mRNA_1754 0.26 0.9
122,240 + 10122 mRNA_1754 0.31 -0.3
122,460 - 10122 mRNA_1754 0.43 1.2
122,461 + 10122 mRNA_1754 0.43 1.7
122,485 + 10122 mRNA_1754 0.44 -0.9
122,505 + 10122 mRNA_1754 0.45 0.4
122,517 + 10122 mRNA_1754 0.46 -0.2
122,518 + 10122 mRNA_1754 0.46 0.4
122,859 - 10122 mRNA_1754 0.65 -1.7
122,878 + 10122 mRNA_1754 0.66 -0.3
122,914 - 10122 mRNA_1754 0.68 2.6
123,206 - 10122 mRNA_1754 0.84 0.1
123,219 + 10122 mRNA_1754 0.84 -0.1
123,328 + 0.7
123,467 + 0.9
123,470 - 2.4
123,767 - 10123 mRNA_1755 0.13 -0.5
123,924 + 10123 mRNA_1755 0.27 0.2
123,926 + 10123 mRNA_1755 0.28 0.4
123,934 - 10123 mRNA_1755 0.28 0.9
123,942 + 10123 mRNA_1755 0.29 0.9
124,349 - 10123 mRNA_1755 0.67 2.6
124,497 + 10123 mRNA_1755 0.80 0.6