Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1744

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96619 to 100637 10111 mRNA_1744: 10112 - Hypothetical Protein, at 100843 to 102379 10112 mRNA_1745: 10113 - K09829 ERG2 C-8 sterol isomerase, at 102817 to 103817 10113

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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99,937 - 10111 mRNA_1743 0.83 0.5
100,106 + 10111 mRNA_1743 0.87 0.2
100,213 + 10111 mRNA_1743 0.89 -1.5
100,373 - 1.1
100,381 - -0.1
100,519 - 0.6
100,630 - 0.1
100,656 + 0.8
100,668 + 0.7
100,696 + 0.7
100,748 + -1.5
100,819 - 1.5
101,177 - 10112 mRNA_1744 0.22 0.9
101,182 + 10112 mRNA_1744 0.22 -0.4
101,749 - 10112 mRNA_1744 0.59 2.0
101,889 - 10112 mRNA_1744 0.68 -0.1
101,895 - 10112 mRNA_1744 0.68 1.3
101,916 + 10112 mRNA_1744 0.70 -0.6
101,937 + 10112 mRNA_1744 0.71 0.7
102,041 - 10112 mRNA_1744 0.78 0.7
102,052 + 10112 mRNA_1744 0.79 2.9
102,062 - 10112 mRNA_1744 0.79 -0.9
102,079 + 10112 mRNA_1744 0.80 0.4
102,172 - 10112 mRNA_1744 0.86 -0.0
102,391 + 0.6
102,474 + -0.3
102,476 - 0.0
102,563 - -0.1
102,588 - -0.1
102,639 - 0.6
102,644 - 0.1
102,649 + 1.0
102,651 + 1.2
102,652 - -0.9
102,794 + -0.1
102,815 + 0.5