Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1677

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1677: 10045 - K15620 GOLPH3, GPP34 golgi phosphoprotein 3, at 868769 to 870335 10045 mRNA_1678: 10046 - K09498 CCT6 T-complex protein 1 subunit zeta, at 870469 to 873019 10046

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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868,215 + 1.4
868,360 - -0.7
868,403 + 0.3
868,783 + 0.7
869,318 - 10045 mRNA_1677 0.35 -0.3
869,373 + 10045 mRNA_1677 0.39 1.0
869,406 + 10045 mRNA_1677 0.41 0.7
869,520 - 10045 mRNA_1677 0.48 0.7
869,651 - 10045 mRNA_1677 0.56 1.1
869,780 - 10045 mRNA_1677 0.65 0.3
869,786 + 10045 mRNA_1677 0.65 0.3
869,809 + 10045 mRNA_1677 0.66 1.3
869,934 - 10045 mRNA_1677 0.74 1.2
869,966 - 10045 mRNA_1677 0.76 0.6
869,975 + 10045 mRNA_1677 0.77 0.7
869,987 + 10045 mRNA_1677 0.78 1.7
869,990 - 10045 mRNA_1677 0.78 2.3
869,993 - 10045 mRNA_1677 0.78 -0.2
870,106 - 10045 mRNA_1677 0.85 0.2
870,108 + 10045 mRNA_1677 0.85 -0.0
870,151 - 10045 mRNA_1677 0.88 -0.2
870,160 + 10045 mRNA_1677 0.89 0.2
870,252 + 2.5
870,401 + 0.3
870,402 - 1.0
870,403 + 2.8
870,403 + 0.8
870,404 - 0.3
870,406 - 2.2
870,417 + -1.0
870,422 + 2.2
870,426 + 2.5
870,436 + -0.1
870,437 + -0.1