Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1676

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043 mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865613 to 866688 10044

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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864,812 - -2.8
865,105 - 0.5
865,106 - 0.2
865,123 + 0.7
865,386 + 0.2
865,423 - 0.1
865,462 + 1.0
865,695 - -0.3
865,786 + 10044 mRNA_1676 0.16 -1.3
866,166 + 10044 mRNA_1676 0.51 0.7
866,224 + 10044 mRNA_1676 0.57 1.7
866,282 - 10044 mRNA_1676 0.62 -0.2
866,303 - 10044 mRNA_1676 0.64 -0.7
866,395 + 10044 mRNA_1676 0.73 -1.1
866,397 - 10044 mRNA_1676 0.73 -0.6
866,433 + 10044 mRNA_1676 0.76 0.6
866,749 + -0.8
866,800 + -0.7
867,217 + 1.3