Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1614

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722930 to 724798 9982 mRNA_1615: 9983 - K03283 HSPA1_8 heat shock 70kDa protein 1/8, at 725267 to 727926 9983

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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722,132 - 9981 mRNA_1613 0.78 0.2
722,273 - 9981 mRNA_1613 0.83 -0.2
722,605 - -2.0
722,743 + 1.3
722,884 + 1.9
723,005 - 0.2
723,025 + 0.2
723,030 - 1.4
723,033 + 1.1
723,127 + 9982 mRNA_1614 0.11 -1.4
723,176 - 9982 mRNA_1614 0.13 2.1
724,021 + 9982 mRNA_1614 0.58 -1.5
724,337 - 9982 mRNA_1614 0.75 1.2
724,769 - -0.3
725,242 + 1.5
725,419 + -0.7
725,560 - 9983 mRNA_1615 0.11 0.6