Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1551

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571932 to 573047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573433 to 575580 9920

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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570,946 + 1.0
571,044 - 0.1
571,191 - 0.6
571,212 + 1.8
571,239 + 2.0
571,343 - 0.1
571,468 + -1.1
571,491 - 1.4
571,510 - 0.5
571,516 + 0.9
571,525 - -2.6
571,536 + 0.3
571,561 - -0.1
571,591 + 0.8
571,619 - 1.7
571,643 - 0.6
571,646 - 0.3
571,655 + -0.3
571,674 + 0.6
571,676 + 0.1
571,711 + -0.2
571,809 - 0.9
571,816 - 0.5
571,818 - 1.3
571,956 + -0.5
571,960 - -1.3
572,105 + 9919 mRNA_1551 0.16 0.1
572,306 - 9919 mRNA_1551 0.34 -0.2
572,346 - 9919 mRNA_1551 0.37 0.6
572,547 + 9919 mRNA_1551 0.55 0.6
572,564 - 9919 mRNA_1551 0.57 -0.4
572,685 + 9919 mRNA_1551 0.67 0.2
572,882 - 9919 mRNA_1551 0.85 0.4
572,899 + 9919 mRNA_1551 0.87 0.5
573,586 + 0.0
573,648 + 9920 mRNA_1552 0.10 -0.7
573,680 - 9920 mRNA_1552 0.11 1.4
573,988 - 9920 mRNA_1552 0.26 -0.0