Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1406

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1406: 9774 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 195890 to 197396 9774

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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195,108 + -0.7
195,111 - -2.3
195,246 - -0.8
195,263 - 0.2
195,408 + 2.1
195,437 - 2.9
195,446 + -0.1
195,447 + 0.6
195,448 - 0.6
195,454 + 0.2
195,458 - 0.3
195,470 + 0.3
195,471 + -0.4
195,476 + 0.8
195,487 - 2.1
195,487 - -0.0
195,489 - 1.6
195,491 - -0.6
195,497 + -0.6
195,507 + -0.1
195,510 - 0.6
195,512 + 1.6
195,522 - -0.6
195,529 - 2.0
195,535 + -0.5
195,539 + 1.0
195,543 + 2.1
195,551 + 3.4
195,554 - 1.0
195,554 - 1.0
195,554 - -0.5
195,555 + 0.2
195,571 + 0.3
195,575 + -0.7
195,584 + 1.0
195,591 - 0.8
195,591 - 0.9
195,623 + 1.7
195,636 - 0.9
195,636 - -0.6
195,742 - 0.5
195,760 + 0.3
195,796 - -0.0
195,884 - 1.5
196,009 - 0.0
196,201 - 9774 mRNA_1406 0.21 -0.2
196,212 + 9774 mRNA_1406 0.21 1.7
196,219 - 9774 mRNA_1406 0.22 -0.7
196,368 + 9774 mRNA_1406 0.32 1.0
196,382 - 9774 mRNA_1406 0.33 -0.2
196,499 + 9774 mRNA_1406 0.40 -0.4
196,602 + 9774 mRNA_1406 0.47 2.7
196,649 - 9774 mRNA_1406 0.50 0.8
196,768 - 9774 mRNA_1406 0.58 -0.2
197,073 + 9774 mRNA_1406 0.79 0.2
197,228 + 9774 mRNA_1406 0.89 -0.4
197,349 - 0.6
197,497 - -0.3
197,509 - 2.0
198,111 - 1.6
198,275 + 0.4