Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1399

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1399: 9767 - Hypothetical Protein, at 179296 to 180900 9767 mRNA_1400: 9768 - K20360 TBC1D22, GYP1 TBC1 domain family member 2, at 181487 to 184184 9768

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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178,468 - -1.0
178,500 + -1.1
178,929 + 1.0
179,524 + 9767 mRNA_1399 0.14 0.6
179,534 + 9767 mRNA_1399 0.15 0.2
179,650 - 9767 mRNA_1399 0.22 0.3
179,965 - 9767 mRNA_1399 0.42 -0.1
180,172 - 9767 mRNA_1399 0.55 -0.3
180,270 - 9767 mRNA_1399 0.61 0.6
180,397 + 9767 mRNA_1399 0.69 -0.1
180,539 + 9767 mRNA_1399 0.77 0.0
180,701 + 9767 mRNA_1399 0.88 1.1
181,106 - 4.0
181,672 - -0.2
181,698 + 0.1
181,728 + -0.7
181,848 - 9768 mRNA_1400 0.13 0.1
181,854 + 9768 mRNA_1400 0.14 0.5