Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1386

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147599 to 148550 9754 mRNA_1387: 9755 - BLAST bromodomain-containing protein 8 [Cryptococcus ne..., at 148746 to 149519 9755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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146,618 - 9753 mRNA_1385 0.69 0.5
146,748 - 9753 mRNA_1385 0.82 0.3
146,924 - -0.0
146,958 + -0.9
147,043 - 0.5
147,053 - -1.4
147,074 + -0.6
147,512 - -0.2
147,657 - 0.1
147,674 + 0.5
148,066 + 9754 mRNA_1386 0.49 0.6
148,071 - 9754 mRNA_1386 0.50 0.4
148,205 + 9754 mRNA_1386 0.64 0.5
148,213 + 9754 mRNA_1386 0.64 -2.9
148,517 - 0.0
148,551 + -0.5
148,799 + 1.8
148,816 + -0.5
148,820 - -0.1
148,831 + 9755 mRNA_1387 0.11 0.6
148,841 - 9755 mRNA_1387 0.12 0.8
148,956 - 9755 mRNA_1387 0.27 0.1
149,117 - 9755 mRNA_1387 0.48 1.4
149,131 - 9755 mRNA_1387 0.50 1.5
149,135 + 9755 mRNA_1387 0.50 2.4
149,137 - 9755 mRNA_1387 0.51 4.2
149,138 + 9755 mRNA_1387 0.51 0.4
149,278 - 9755 mRNA_1387 0.69 0.5
149,404 - 9755 mRNA_1387 0.85 -0.3
149,417 + 9755 mRNA_1387 0.87 -0.8