Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1382

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1381: 9749 - Hypothetical Protein, at 138308 to 139656 9749 mRNA_1382: 9750 - K11805 WDR68, HAN11 WD repeat-containing protein 68, at 139851 to 141572 9750 mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142015 to 143615 9751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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138,861 - 9749 mRNA_1381 0.41 0.4
139,130 - 9749 mRNA_1381 0.61 -0.0
139,142 - 9749 mRNA_1381 0.62 0.3
139,316 - 9749 mRNA_1381 0.75 1.6
139,420 + 9749 mRNA_1381 0.82 -0.4
139,712 + 0.8
139,836 + -0.3
139,858 - -0.3
139,862 + 0.8
139,865 + -1.1
139,868 - 1.5
139,870 + -0.2
140,033 - 9750 mRNA_1382 0.11 0.6
140,045 - 9750 mRNA_1382 0.11 1.1
140,050 + 9750 mRNA_1382 0.12 2.7
140,163 + 9750 mRNA_1382 0.18 1.9
140,169 - 9750 mRNA_1382 0.18 2.0
140,185 - 9750 mRNA_1382 0.19 1.3
140,194 + 9750 mRNA_1382 0.20 1.4
140,295 - 9750 mRNA_1382 0.26 1.9
140,598 - 9750 mRNA_1382 0.43 2.9
140,643 + 9750 mRNA_1382 0.46 0.4
140,890 - 9750 mRNA_1382 0.60 1.2
140,904 + 9750 mRNA_1382 0.61 0.8
141,184 + 9750 mRNA_1382 0.77 0.7
141,214 + 9750 mRNA_1382 0.79 3.3
141,302 - 9750 mRNA_1382 0.84 0.6
141,348 - 9750 mRNA_1382 0.87 1.8
141,397 + 9750 mRNA_1382 0.90 0.6
141,515 - 2.2
141,789 - -0.1
141,817 + 2.1
141,826 - 0.2
141,958 + 0.7