Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1355

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1354: 9722 - Hypothetical Protein, at 69556 to 71202 9722 mRNA_1355: 9723 - SUPERFAMILY--SSF50685, at 72198 to 73021 9723

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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71,234 - -0.8
71,301 + 0.3
71,420 - 3.4
71,423 + 2.1
71,448 - 1.6
71,556 + 0.2
71,591 + 0.3
71,612 - -0.6
71,721 + 1.3
71,735 - 1.2
71,873 + 0.7
72,058 + 1.7
72,155 + 0.1
72,158 + 1.3
72,321 - 9723 mRNA_1355 0.15 2.7
72,431 - 9723 mRNA_1355 0.28 0.8
72,446 - 9723 mRNA_1355 0.30 3.2
72,454 + 9723 mRNA_1355 0.31 0.9
72,464 - 9723 mRNA_1355 0.32 0.3
72,639 - 9723 mRNA_1355 0.54 0.3
72,704 - 9723 mRNA_1355 0.61 1.7
72,748 - 9723 mRNA_1355 0.67 0.1
72,751 + 9723 mRNA_1355 0.67 1.6
72,881 - 9723 mRNA_1355 0.83 -0.2
72,893 - 9723 mRNA_1355 0.84 -0.3
73,030 + 1.0
73,060 + -1.0
73,062 - 0.5
73,269 - 0.0
73,297 - 1.3
73,306 - -0.4
73,308 - -0.1
73,310 - -0.7
73,314 - 1.6
73,337 - 0.5
73,338 + -0.2
73,343 - 0.9
73,345 - 1.1
73,352 - -1.1
73,353 + 0.6
73,359 - 1.2
73,360 - 0.8
73,368 + 1.7
73,459 + 1.8
73,493 - 1.3
73,498 + 1.1
73,506 - 0.3
73,521 - 0.6
73,558 - 0.3
73,591 + 2.6
73,601 - -0.1
73,630 - 0.6
73,631 - 1.4
73,647 - 0.4
73,649 - 3.0
73,654 + 0.3
73,662 - -1.0
73,663 + -0.2
73,666 - 0.3
73,668 + -0.2
73,747 - 0.4
73,794 + 2.8
73,840 + 0.3
73,846 + -0.1
73,850 - 0.6
73,850 + 0.1
73,867 - -0.7
73,869 - 0.7
73,869 - -0.2
73,877 - 1.0
73,901 - 0.3
73,926 - 0.2
73,949 - 0.9
74,007 - 0.6