Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1350

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1349: 9717 - K12852 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component, at 56192 to 59943 9717 mRNA_1350: 9718 - KOG3376 Uncharacterized conserved protein, at 60182 to 60785 9718 mRNA_1351: 9719 - Hypothetical Protein, at 61226 to 65910 9719

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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59,959 - 0.0
60,006 + 1.1
60,135 - -0.8
60,141 - 2.4
60,164 + 0.8
60,184 + 0.1
60,317 + 9718 mRNA_1350 0.22 -0.9
60,319 + 9718 mRNA_1350 0.23 1.1
60,452 - 9718 mRNA_1350 0.45 0.4
60,892 + 1.0
61,038 - 0.0
61,050 + 0.1
61,054 + -0.0
61,150 + -0.8
61,209 + -0.8
61,304 + 0.3
61,334 - 0.8
61,404 - 0.8
61,458 - 1.9
61,480 - 0.2
61,493 + -0.9
61,772 - 9719 mRNA_1351 0.12 -1.1