Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1346

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1345: 9713 - KOG2533 Permease of the major facilitator superfamily, at 47713 to 50221 9713 mRNA_1346: 9714 - Hypothetical Protein, at 50487 to 51327 9714

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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49,489 + 9713 mRNA_1345 0.71 0.2
49,497 - 9713 mRNA_1345 0.71 2.6
49,516 + 9713 mRNA_1345 0.72 1.0
49,602 - 9713 mRNA_1345 0.75 -0.8
49,648 - 9713 mRNA_1345 0.77 -0.7
49,818 - 9713 mRNA_1345 0.84 -0.4
49,820 + 9713 mRNA_1345 0.84 -0.0
49,921 - 9713 mRNA_1345 0.88 0.7
49,962 - 9713 mRNA_1345 0.90 0.6
50,203 + 0.7
50,239 + 0.4
50,432 + -1.6
50,481 + 0.7
50,484 - 1.2
50,517 + 0.2
50,688 + 9714 mRNA_1346 0.24 -0.3
50,711 + 9714 mRNA_1346 0.27 0.7
50,725 + 9714 mRNA_1346 0.28 1.5
50,821 - 9714 mRNA_1346 0.40 1.2
50,856 + 9714 mRNA_1346 0.44 0.6
51,021 - 9714 mRNA_1346 0.63 0.1
51,118 + 9714 mRNA_1346 0.75 0.6
51,324 - -1.9
51,363 - 1.4
51,697 - 1.7
51,856 - 1.7
51,871 - -0.1
51,877 + -1.5
51,886 + 0.4
52,002 - -0.4
52,018 + 0.2