Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1 + -0.1
25 + 0.4
49 - 0.6
50 + 0.1
53 + -2.8
57 - 0.2
57 + -2.8
58 - 0.3
62 + 0.2
62 - 0.9
76 + -0.7
109 + -0.3
122 + 2.4
125 - 0.1
126 + -0.8
128 - 0.8
134 + -2.7
143 + 0.4
144 + 0.1
148 + -1.0
176 - -0.9
186 + 0.8
199 + 0.2
240 + -0.9
240 + -1.8
250 + -0.2
250 + 0.7
256 - 1.5
279 + 1.5
282 + -0.4
286 - 1.7
290 + 0.2
542 - 9694 mRNA_1326 0.21 0.2
545 + 9694 mRNA_1326 0.22 0.5
726 - 9694 mRNA_1326 0.34 0.2
1,007 + 9694 mRNA_1326 0.53 -3.3
1,016 - 9694 mRNA_1326 0.54 -1.4
1,322 - 9694 mRNA_1326 0.74 0.4
1,417 - 9694 mRNA_1326 0.81 -0.1
1,888 - -1.0
1,889 - 0.6
2,000 + -0.9
2,009 + 1.4
2,141 - 0.1
2,152 - 1.5
2,166 + 1.1
2,167 + 0.1
2,173 + 0.8
2,180 - 0.3
2,180 + 0.2
2,189 + -1.0
2,189 + 0.5
2,197 + -2.3
2,246 + -0.4
2,333 - 1.5
2,471 + 0.9
2,490 + -0.5