Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1285

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1284: 9652 - K12897 TRA2 transformer-2 protein, at 832225 to 833165 9652 mRNA_1285: 9653 - Interpro Ribosomal protein 60S L18 and 50S L18e 0, at 833879 to 834376 9653 mRNA_1286: 9654 - HMMPfam-short chain dehydrogenase-PF00106,SUPERFAMILY--SSF51735, at 834621 to 836012 9654

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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833,218 + 0.7
833,511 + 0.7
833,771 + -0.7
833,803 - 1.3
833,936 - 9653 mRNA_1285 0.11 -0.4
833,994 - 9653 mRNA_1285 0.23 0.9
834,255 + 9653 mRNA_1285 0.76 -1.0
834,635 - 0.4
834,672 - -0.4
834,682 + 0.4
834,838 + 9654 mRNA_1286 0.16 1.2
834,981 + 9654 mRNA_1286 0.26 0.7
834,986 - 9654 mRNA_1286 0.26 1.4
835,095 - 9654 mRNA_1286 0.34 2.1