Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1281

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1280: 9648 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657, at 825311 to 827101 9648 mRNA_1281: 9649 - HMMPfam-Peptidase M50B-like-PF13398, at 827341 to 829667 9649 mRNA_1282: 9650 - Hypothetical Protein, at 829731 to 830277 9650 mRNA_1283: 9651 - K02883 RP-L18e, RPL18 large subunit ribosomal protein L18e, at 830551 to 831805 9651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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826,980 + 0.0
826,982 + -0.3
826,986 + 2.2
827,048 + -0.4
827,056 + 3.1
827,147 - -1.5
827,293 - 0.4
827,305 + 1.6
827,345 + 1.4
827,413 + 2.2
827,425 + 1.1
827,444 + 0.5
827,495 - -1.3
827,512 - 0.4
827,593 - 9649 mRNA_1281 0.11 0.8
827,594 + 9649 mRNA_1281 0.11 0.7
827,653 + 9649 mRNA_1281 0.13 0.6
827,858 + 9649 mRNA_1281 0.22 0.3
827,878 - 9649 mRNA_1281 0.23 -0.2
827,983 - 9649 mRNA_1281 0.28 0.0
828,177 - 9649 mRNA_1281 0.36 1.9
828,454 - 9649 mRNA_1281 0.48 -0.0
828,500 + 9649 mRNA_1281 0.50 -0.8
828,597 + 9649 mRNA_1281 0.54 0.1
828,605 - 9649 mRNA_1281 0.54 -0.0
828,736 + 9649 mRNA_1281 0.60 0.6
828,744 + 9649 mRNA_1281 0.60 -0.1
828,889 + 9649 mRNA_1281 0.67 -0.0
829,020 + 9649 mRNA_1281 0.72 2.6
829,232 + 9649 mRNA_1281 0.81 0.3
829,468 - 1.2
829,803 - 9650 mRNA_1282 0.13 0.6
830,235 - 0.7
830,240 + 0.7
830,364 + 1.6
830,371 - 0.4