Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1257

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767980 to 768375 9624 mRNA_1257: 9625 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 768823 to 770242 9625 mRNA_1258: 9626 - Hypothetical Protein, at 770373 to 771317 9626

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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767,910 + 0.0
767,914 - 0.4
768,001 + -0.8
768,011 + 1.0
768,383 - 1.0
768,531 - 0.5
768,537 + 0.2
768,631 + -1.5
768,753 + 0.8
768,768 + 1.0
769,036 - 9625 mRNA_1257 0.15 1.5
769,095 - 9625 mRNA_1257 0.19 0.9
769,212 + 9625 mRNA_1257 0.27 0.5
769,362 - 9625 mRNA_1257 0.38 1.4
769,369 + 9625 mRNA_1257 0.38 -1.0
769,371 - 9625 mRNA_1257 0.39 0.4
769,398 - 9625 mRNA_1257 0.40 1.7
769,450 + 9625 mRNA_1257 0.44 0.3
769,512 - 9625 mRNA_1257 0.49 0.4
769,541 + 9625 mRNA_1257 0.51 -1.0
769,692 - 9625 mRNA_1257 0.61 -0.2
769,693 + 9625 mRNA_1257 0.61 -0.2
769,695 + 9625 mRNA_1257 0.61 -0.6
769,950 + 9625 mRNA_1257 0.79 -0.5
769,983 - 9625 mRNA_1257 0.82 0.5
770,068 + 9625 mRNA_1257 0.88 -0.3
770,267 + 1.4
770,409 - -0.4