Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1200

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1199: 9567 - K02325 POLE2 DNA polymerase epsilon subunit 2, at 634120 to 636519 9567 mRNA_1200: 9568 - KOG3132 m3G-cap-specific nuclear import receptor (Snurportin1), at 636732 to 638216 9568 mRNA_1201: 9569 - K12625 LSM6 U6 snRNA-associated Sm-like protein LSm6, at 638418 to 638898 9569

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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636,668 - 0.1
636,680 - -1.5
636,955 + 9568 mRNA_1200 0.15 0.4
637,313 - 9568 mRNA_1200 0.39 1.3
637,341 - 9568 mRNA_1200 0.41 1.1
637,499 - 9568 mRNA_1200 0.52 0.9
637,668 - 9568 mRNA_1200 0.63 -0.6
637,693 + 9568 mRNA_1200 0.65 0.5
637,696 - 9568 mRNA_1200 0.65 1.3
638,006 - 9568 mRNA_1200 0.86 -0.9
638,166 + 2.0
638,193 - 0.4
639,063 - 3.1