Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1094

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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392,847 + 1.1
392,873 + 0.0
392,898 - 2.4
393,027 - -0.9
393,121 + -0.7
393,143 - 0.1
393,145 - 1.9
393,149 - 0.2
393,182 - 0.9
393,271 - -0.5
393,292 + 1.6
393,297 - -0.5
393,302 - -0.6
393,303 + -0.5
393,307 + -1.1
393,335 + -0.5
393,440 + 1.8
393,443 + 0.6
393,447 + 0.5
393,461 + 2.7
393,543 - -0.7
393,549 - 0.3
393,552 + -0.3
393,577 + 0.8
393,578 + 2.3
393,579 - 0.8
393,589 - -0.1
393,597 + 0.1
393,612 - -0.8
393,618 + -0.2
393,622 + 0.3
393,762 + 0.8
393,892 + 9462 mRNA_1094 0.11 -0.9
394,005 + 9462 mRNA_1094 0.18 -2.0
394,036 + 9462 mRNA_1094 0.20 0.9
394,070 - 9462 mRNA_1094 0.22 -0.5
394,352 - 9462 mRNA_1094 0.39 1.6
394,502 - 9462 mRNA_1094 0.49 -0.6
394,625 - 9462 mRNA_1094 0.56 0.2
394,649 + 9462 mRNA_1094 0.58 -0.7
394,788 - 9462 mRNA_1094 0.67 0.9
395,065 + 9462 mRNA_1094 0.84 0.3
395,211 - 0.2
395,247 + 0.9
395,314 - 0.3
395,344 + 0.2
395,473 + -0.1
395,657 - -0.2
395,815 - 0.6
395,823 + 1.7
396,101 + 9463 mRNA_1095 0.21 -0.4
396,114 + 9463 mRNA_1095 0.22 2.4