Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1084

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1084: 9452 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 371981 to 373255 9452 mRNA_1085: 9453 - Hypothetical Protein, at 373772 to 374332 9453

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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371,219 - -0.6
371,228 + -0.4
371,244 + 0.7
371,354 + 0.3
371,459 - -0.3
371,460 + -1.7
371,462 - -0.3
371,466 - -1.1
371,468 + 0.9
372,109 - 9452 mRNA_1084 0.10 -0.7
372,136 - 9452 mRNA_1084 0.12 1.2
372,217 - 9452 mRNA_1084 0.19 0.3
372,643 - 9452 mRNA_1084 0.52 0.4
372,668 + 9452 mRNA_1084 0.54 -0.8
372,674 - 9452 mRNA_1084 0.54 -0.8
372,675 + 9452 mRNA_1084 0.54 -1.0
372,792 + 9452 mRNA_1084 0.64 -0.4
372,811 + 9452 mRNA_1084 0.65 -0.2
372,812 - 9452 mRNA_1084 0.65 -0.8
372,854 - 9452 mRNA_1084 0.68 1.6
373,119 - 9452 mRNA_1084 0.89 0.1
373,140 + -0.3
373,551 + 1.7
373,591 - 0.1
373,591 - 0.4
373,597 + -1.3
373,597 - 1.1
373,746 - 1.5
373,790 - 2.5
373,888 - 9453 mRNA_1085 0.21 1.6
373,919 + 9453 mRNA_1085 0.26 -0.4
373,937 - 9453 mRNA_1085 0.29 0.0