Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1055

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1055: 9423 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 292025 to 293259 9423

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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291,083 - -0.4
291,088 - 0.8
291,093 - -0.1
291,102 + 0.0
291,146 - 0.4
291,157 - -0.4
291,158 + 1.1
291,199 + -0.6
291,253 - 0.9
291,269 + -0.4
291,321 - -1.9
291,383 - 0.3
291,415 + 1.1
291,429 + -0.8
291,444 - 1.3
291,448 - 0.0
291,460 + 0.7
291,460 + 0.3
291,462 - -0.2
291,467 + 1.1
291,482 + 0.1
291,500 + 0.9
291,513 + -1.6
291,627 - 0.8
291,633 - 0.1
291,642 + 0.1
291,662 - -0.5
291,664 - -0.3
291,668 + 0.2
291,669 + -0.5
291,681 + 0.6
291,685 + -0.3
291,685 - -1.3
291,739 + 0.8
291,740 + -1.3
291,743 - 0.5
291,747 + 1.2
291,748 - 1.6
291,752 - 1.5
291,761 - 0.5
291,767 - 0.5
291,778 - 1.6
291,779 + -0.4
291,779 + 0.9
291,797 + 2.1
291,801 + 0.0
291,809 - 1.3
291,813 + -2.0
291,816 - 4.1
291,845 - 0.4
291,850 - 0.4
291,853 + -0.2
291,867 + 1.1
291,869 - 0.5
291,873 - 1.9
291,873 + 1.4
291,889 - -0.7
291,903 + 0.9
291,935 + -0.4
291,987 - -0.1
292,012 + 0.8
292,017 + -0.8
292,036 + 0.5
292,040 + 1.0
292,644 + 9423 mRNA_1055 0.50 0.3
292,893 + 9423 mRNA_1055 0.70 0.5
293,339 + 1.2
293,344 + -0.5
293,346 - -0.2
293,349 + 0.8
293,488 + 0.2
293,495 - 0.3
293,500 + 0.2
293,584 + 0.3
293,589 - 0.9
293,596 - -0.5
293,650 + -0.8
293,658 + -0.5
294,211 - 0.0