Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1051

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274076 to 276723 9417 mRNA_1050: 9418 - Hypothetical Protein, at 277002 to 277499 9418 mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665 9419 mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282030 to 286830 9420

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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276,722 - -0.4
276,759 + 0.2
276,785 + 0.1
276,920 + 1.0
276,920 - 1.8
276,925 + -1.1
276,928 + -0.0
276,930 + 1.7
276,931 - 2.1
276,949 + 1.8
276,960 - 0.1
277,069 - 9418 mRNA_1050 0.13 -0.0
277,209 + 9418 mRNA_1050 0.42 -0.3
277,243 + 9418 mRNA_1050 0.48 1.7
277,349 - 9418 mRNA_1050 0.70 -0.4
277,353 + 9418 mRNA_1050 0.70 1.6
277,381 + 9418 mRNA_1050 0.76 -0.2
278,259 + 9419 mRNA_1051 0.17 0.5
278,286 + 9419 mRNA_1051 0.17 0.3
278,711 + 9419 mRNA_1051 0.28 1.2
278,818 - 9419 mRNA_1051 0.30 1.1
279,031 + 9419 mRNA_1051 0.35 1.9
279,068 - 9419 mRNA_1051 0.36 -0.9
279,117 - 9419 mRNA_1051 0.38 1.8
279,157 + 9419 mRNA_1051 0.39 0.1
279,173 + 9419 mRNA_1051 0.39 1.9
279,364 - 9419 mRNA_1051 0.44 0.2
279,454 - 9419 mRNA_1051 0.46 0.1
279,460 - 9419 mRNA_1051 0.46 -0.0
279,541 - 9419 mRNA_1051 0.48 0.6
279,582 - 9419 mRNA_1051 0.49 -0.2
279,694 - 9419 mRNA_1051 0.52 0.5
279,843 + 9419 mRNA_1051 0.55 0.0
280,171 + 9419 mRNA_1051 0.63 0.8
280,295 + 9419 mRNA_1051 0.66 0.6
280,325 + 9419 mRNA_1051 0.67 -0.3
280,907 + 9419 mRNA_1051 0.81 0.6
280,909 - 9419 mRNA_1051 0.81 -1.0
280,930 + 9419 mRNA_1051 0.82 1.7
281,194 - 9419 mRNA_1051 0.88 0.0
281,482 - -0.2
281,640 + -0.8
281,799 - -0.0
281,809 - 0.4
281,815 - -0.7
281,817 + 1.5
281,819 - -3.7
281,841 - 0.7
281,932 - 0.5
281,951 - 0.1
281,966 - -0.6
281,986 + 1.7
282,006 + 0.4
282,080 + 0.7
282,129 - 0.0
282,161 + -0.3
282,407 + -0.2
282,438 + -0.9
282,494 + 1.4
282,502 + 0.2
282,574 - 9420 mRNA_1052 0.11 -1.2