Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1027

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233944 to 234631 9394 mRNA_1027: 9395 - Hypothetical Protein, at 235522 to 235827 9395 mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236228 to 240194 9396

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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234,880 + 1.5
235,005 - -0.4
235,013 + -0.2
235,271 - -0.3
235,484 + 1.3
235,488 + -0.1
235,492 - -0.0
235,594 - 9395 mRNA_1027 0.24 -1.2
235,783 - 9395 mRNA_1027 0.85 -0.1
235,938 + -2.0
236,028 + 0.8
236,031 - 0.2
236,031 - -0.4
236,034 + 0.6
236,047 + 1.3
236,193 + 1.2
236,344 + 0.5
236,358 + -0.0