Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_966

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333 mRNA_966: 9334 - BLAST probable GUS1-Glutamyl-tRNA synthetase [Ustilago hordei], at 92031 to 92569 9334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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91,225 - 9333 mRNA_965 0.84 -0.6
91,326 + -0.2
91,357 + 0.0
91,371 + 1.1
91,468 + 0.1
91,468 + 0.5
91,469 - 0.8
91,614 - -0.2
91,615 - 0.1
91,617 + 0.5
91,642 + -0.7
91,650 - -1.1
91,805 - -0.8
91,816 + -0.1
91,951 + -1.4
91,953 + -0.5
91,970 - 2.9
91,974 - 1.5
91,988 + -0.7
92,075 - -0.7
92,116 + 9334 mRNA_966 0.16 -1.6
92,210 + 9334 mRNA_966 0.33 0.2
92,386 + 9334 mRNA_966 0.66 0.3
92,412 + 9334 mRNA_966 0.71 3.1
92,413 + 9334 mRNA_966 0.71 0.6
92,570 + 1.0
92,667 + 0.6
92,680 + -0.8
92,688 + -0.5
92,821 - 0.4
93,158 + 0.4
93,234 - 1.1
93,279 - 1.3
93,293 + 0.6
93,298 + -0.4
93,399 + 0.1
93,450 - 0.0
93,563 + 0.5