Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_965

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332 mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333 mRNA_966: 9334 - BLAST probable GUS1-Glutamyl-tRNA synthetase [Ustilago hordei], at 92031 to 92569 9334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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89,170 + -0.4
89,229 - 1.3
89,508 - -1.1
89,684 + -0.8
89,863 - 1.4
89,949 + -0.3
90,054 - 2.3
90,054 + 0.3
90,189 + -0.7
90,191 - 1.6
90,336 - 9333 mRNA_965 0.19 1.5
90,632 - 9333 mRNA_965 0.40 -1.9
90,643 + 9333 mRNA_965 0.41 -0.1
90,902 + 9333 mRNA_965 0.60 -2.2
90,923 - 9333 mRNA_965 0.62 -1.3
91,225 - 9333 mRNA_965 0.84 -0.6
91,326 + -0.2
91,357 + 0.0
91,371 + 1.1
91,468 + 0.1
91,468 + 0.5
91,469 - 0.8
91,614 - -0.2
91,615 - 0.1
91,617 + 0.5
91,642 + -0.7
91,650 - -1.1
91,805 - -0.8
91,816 + -0.1
91,951 + -1.4
91,953 + -0.5
91,970 - 2.9
91,974 - 1.5
91,988 + -0.7
92,075 - -0.7
92,116 + 9334 mRNA_966 0.16 -1.6
92,210 + 9334 mRNA_966 0.33 0.2
92,386 + 9334 mRNA_966 0.66 0.3
92,412 + 9334 mRNA_966 0.71 3.1
92,413 + 9334 mRNA_966 0.71 0.6