Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_964

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_963: 9331 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 84124 to 85910 9331 mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332 mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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85,857 - 0.7
85,974 - 0.6
85,975 + -0.3
85,986 + 1.2
85,991 - -2.8
86,007 + 1.6
86,013 + -0.1
86,013 + 0.3
86,019 + 2.4
86,022 + 1.0
86,073 - 1.0
86,083 - -0.0
86,089 - -0.8
86,090 + -0.1
86,094 + -0.3
86,095 + 0.5
86,097 + 0.9
86,104 - 0.1
86,108 + -0.3
86,119 + 0.7
86,124 - 2.7
86,130 + 0.2
86,132 + 2.9
86,133 + -0.5
86,138 - -0.5
86,140 - 0.6
86,266 + 0.7
86,420 + 0.5
86,477 + 1.6
86,595 + -0.6
86,661 + 1.7
86,881 + -0.5
87,150 + 9332 mRNA_964 0.16 -0.5
87,158 - 9332 mRNA_964 0.16 -0.1
87,176 - 9332 mRNA_964 0.17 -0.5
87,348 - 9332 mRNA_964 0.23 2.8
87,650 - 9332 mRNA_964 0.34 1.1
87,910 + 9332 mRNA_964 0.44 2.0
88,019 + 9332 mRNA_964 0.48 1.0
88,039 + 9332 mRNA_964 0.49 0.8
88,066 - 9332 mRNA_964 0.50 -1.1
88,188 + 9332 mRNA_964 0.54 -0.0
88,193 + 9332 mRNA_964 0.55 -0.8
88,199 + 9332 mRNA_964 0.55 -1.4
88,592 - 9332 mRNA_964 0.69 0.1
88,595 + 9332 mRNA_964 0.70 -0.5
88,741 + 9332 mRNA_964 0.75 0.6
88,859 - 9332 mRNA_964 0.79 2.2
88,882 + 9332 mRNA_964 0.80 2.4
89,065 - 9332 mRNA_964 0.87 1.8
89,170 + -0.4
89,229 - 1.3
89,508 - -1.1
89,684 + -0.8
89,863 - 1.4
89,949 + -0.3
90,054 - 2.3
90,054 + 0.3
90,189 + -0.7
90,191 - 1.6
90,336 - 9333 mRNA_965 0.19 1.5