Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_949

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_948: 9316 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 41701 to 44858 9316 mRNA_949: 9317 - KOG1268 Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains, at 45301 to 46716 9317 mRNA_950: 9318 - Hypothetical Protein, at 46919 to 47823 9318

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
44,503 - 9316 mRNA_948 0.89 0.2
44,900 + 0.4
45,025 + -1.1
45,026 - 0.5
45,037 + -0.2
45,044 + 0.2
45,056 + -0.2
45,188 + 0.3
45,342 + 2.8
45,465 + 9317 mRNA_949 0.12 0.8
45,482 - 9317 mRNA_949 0.13 0.1
45,484 + 9317 mRNA_949 0.13 0.2
45,586 + 9317 mRNA_949 0.20 0.2
45,590 + 9317 mRNA_949 0.20 0.5
45,590 - 9317 mRNA_949 0.20 0.7
45,596 - 9317 mRNA_949 0.21 2.6
45,619 + 9317 mRNA_949 0.22 -0.8
45,755 - 9317 mRNA_949 0.32 0.0
45,955 + 9317 mRNA_949 0.46 -0.2
46,069 - 9317 mRNA_949 0.54 -1.7
46,175 - 9317 mRNA_949 0.62 0.9
46,217 + 9317 mRNA_949 0.65 0.8
46,799 - -0.4
46,985 - -1.4
47,127 + 9318 mRNA_950 0.23 0.2
47,135 - 9318 mRNA_950 0.24 0.7
47,136 - 9318 mRNA_950 0.24 0.9
47,137 - 9318 mRNA_950 0.24 0.7
47,142 - 9318 mRNA_950 0.25 0.3
47,145 + 9318 mRNA_950 0.25 0.9
47,147 - 9318 mRNA_950 0.25 2.3
47,150 + 9318 mRNA_950 0.26 0.8
47,150 + 9318 mRNA_950 0.26 0.2
47,159 + 9318 mRNA_950 0.27 1.1
47,160 + 9318 mRNA_950 0.27 -0.5
47,165 + 9318 mRNA_950 0.27 0.4
47,166 + 9318 mRNA_950 0.27 1.9
47,166 + 9318 mRNA_950 0.27 0.0
47,201 - 9318 mRNA_950 0.31 0.7
47,204 + 9318 mRNA_950 0.31 0.5
47,206 + 9318 mRNA_950 0.32 3.0
47,207 + 9318 mRNA_950 0.32 0.6
47,207 - 9318 mRNA_950 0.32 0.3
47,210 + 9318 mRNA_950 0.32 0.4
47,212 - 9318 mRNA_950 0.32 1.1
47,217 - 9318 mRNA_950 0.33 0.3
47,223 + 9318 mRNA_950 0.34 -0.3
47,227 - 9318 mRNA_950 0.34 0.8
47,229 + 9318 mRNA_950 0.34 -0.1
47,230 - 9318 mRNA_950 0.34 -0.6
47,250 + 9318 mRNA_950 0.37 -0.9
47,329 + 9318 mRNA_950 0.45 0.1
47,340 + 9318 mRNA_950 0.47 0.7
47,351 + 9318 mRNA_950 0.48 0.3
47,353 + 9318 mRNA_950 0.48 -0.4
47,354 + 9318 mRNA_950 0.48 0.2
47,393 + 9318 mRNA_950 0.52 -0.4
47,395 + 9318 mRNA_950 0.53 -0.2
47,404 - 9318 mRNA_950 0.54 0.2
47,410 + 9318 mRNA_950 0.54 0.1
47,414 + 9318 mRNA_950 0.55 -1.3
47,420 + 9318 mRNA_950 0.55 0.7
47,504 - 9318 mRNA_950 0.65 1.4
47,521 + 9318 mRNA_950 0.67 2.3
47,525 + 9318 mRNA_950 0.67 0.7
47,530 - 9318 mRNA_950 0.68 0.7
47,539 + 9318 mRNA_950 0.69 -0.4
47,549 - 9318 mRNA_950 0.70 1.6
47,552 + 9318 mRNA_950 0.70 0.5
47,577 + 9318 mRNA_950 0.73 0.9
47,577 + 9318 mRNA_950 0.73 0.2
47,622 + 9318 mRNA_950 0.78 0.8
47,705 - 9318 mRNA_950 0.87 0.2