Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_941

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_940: 9308 - Hypothetical Protein, at 25419 to 26964 9308 mRNA_941: 9309 - HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300, at 27276 to 29421 9309 mRNA_942: 9310 - KOG1743 Ferric reductase-like proteins, at 29520 to 30621 9310

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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26,379 + 9308 mRNA_940 0.62 -0.1
26,433 - 9308 mRNA_940 0.66 -3.8
26,439 - 9308 mRNA_940 0.66 1.4
26,441 - 9308 mRNA_940 0.66 -0.6
26,457 - 9308 mRNA_940 0.67 0.5
26,516 - 9308 mRNA_940 0.71 2.1
26,556 + 9308 mRNA_940 0.74 2.7
26,560 + 9308 mRNA_940 0.74 -0.0
26,561 - 9308 mRNA_940 0.74 0.9
26,566 + 9308 mRNA_940 0.74 -0.4
26,619 + 9308 mRNA_940 0.78 3.3
26,629 + 9308 mRNA_940 0.78 1.2
26,672 - 9308 mRNA_940 0.81 -0.4
26,727 + 9308 mRNA_940 0.85 2.1
26,727 - 9308 mRNA_940 0.85 0.8
26,727 - 9308 mRNA_940 0.85 0.4
26,728 + 9308 mRNA_940 0.85 -0.3
26,820 + 0.3
26,822 + -0.6
26,866 - -0.2
26,869 + 1.3
26,891 + -0.1
26,960 - 0.2
27,001 - 2.0
27,021 + 3.1
27,021 - -0.4
27,025 - 0.0
27,025 - -0.2
27,074 - 0.3
27,119 + 2.1
27,156 - 1.2
27,159 - 1.9
27,197 + 0.3
27,409 - 0.7
27,417 - 0.0
27,443 - 0.4
27,447 - -1.5
27,470 - 0.2
27,507 + 9309 mRNA_941 0.11 -0.9
27,559 + 9309 mRNA_941 0.13 -1.7
27,562 - 9309 mRNA_941 0.13 0.3
28,047 - 9309 mRNA_941 0.36 0.7
28,098 + 9309 mRNA_941 0.38 2.0
28,120 + 9309 mRNA_941 0.39 0.5
28,204 - 9309 mRNA_941 0.43 -0.6
28,485 + 9309 mRNA_941 0.56 -0.1
28,717 + 9309 mRNA_941 0.67 -0.5
28,719 - 9309 mRNA_941 0.67 -1.5
28,877 - 9309 mRNA_941 0.75 0.8
28,976 - 9309 mRNA_941 0.79 0.9
29,208 - 1.8
29,253 - 0.5
29,258 + -0.1
29,268 + 1.2
29,303 + 0.2
29,378 + 2.0
29,392 - -1.0
29,402 + 1.8
29,463 - 0.9
29,474 + 0.2
30,419 + 9310 mRNA_942 0.82 -0.4