Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_936

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16670 to 18291 9304

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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15,676 - 9303 mRNA_935 0.67 0.2
15,682 + 9303 mRNA_935 0.68 0.4
15,683 + 9303 mRNA_935 0.68 -0.5
15,687 + 9303 mRNA_935 0.68 0.7
15,689 + 9303 mRNA_935 0.68 1.5
15,813 - 9303 mRNA_935 0.75 -0.0
15,835 - 9303 mRNA_935 0.77 0.7
15,955 - 9303 mRNA_935 0.84 1.5
16,063 - 1.2
16,110 - 1.1
16,143 + 0.3
16,233 + 2.3
16,275 - -2.3
16,309 - 1.8
16,338 - 0.3
16,448 - -1.4
16,455 + 1.7
16,457 - 2.6
16,467 + 0.1
16,473 - 2.2
16,551 + -0.1
16,603 + 1.1
16,699 + -0.0
16,699 + 0.8
16,746 + 0.8
16,801 + 0.2
17,057 + 9304 mRNA_936 0.24 -0.1
17,190 + 9304 mRNA_936 0.32 -0.1
17,339 + 9304 mRNA_936 0.41 1.5
17,615 - 9304 mRNA_936 0.58 1.8
17,727 + 9304 mRNA_936 0.65 2.4
17,813 + 9304 mRNA_936 0.70 2.5
17,909 + 9304 mRNA_936 0.76 0.7
17,959 - 9304 mRNA_936 0.79 1.4
18,343 - 0.2
18,347 + 0.2
18,349 + 0.9
18,359 + -1.0
18,361 + 0.7
18,460 - -0.3
18,486 - 0.9
18,492 - 0.6
18,511 - 1.3
18,621 - 1.1
18,621 - -0.2
18,725 - 0.9
18,735 + -0.7
18,750 - 0.2
18,765 - -0.8
18,774 - 0.9
18,779 - 0.4
18,941 + 0.6
18,954 - 1.2
19,070 + 2.1
19,188 - 0.8
19,201 - -0.2
19,220 + 0.5
19,226 + 0.9
19,228 - 2.7
19,231 + -0.2
19,240 - -1.0