Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_925

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_924: 9292 - KOG0798 Uncharacterized conserved protein, at 2204768 to 2206248 9292 mRNA_925: 9293 - K10704 UBE2V ubiquitin-conjugating enzyme E2 variant, at 2206531 to 2207210 9293

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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2,205,550 + 9292 mRNA_924 0.53 0.3
2,205,642 - 9292 mRNA_924 0.59 1.3
2,205,769 + 9292 mRNA_924 0.68 0.8
2,205,893 + 9292 mRNA_924 0.76 1.0
2,205,923 - 9292 mRNA_924 0.78 -0.8
2,206,064 - 9292 mRNA_924 0.88 0.9
2,206,295 - -0.4
2,206,327 - 1.0
2,206,516 - -1.0
2,206,650 + 9293 mRNA_925 0.17 0.8
2,206,805 - 9293 mRNA_925 0.40 2.0
2,206,928 - 9293 mRNA_925 0.58 3.2
2,206,941 - 9293 mRNA_925 0.60 0.6
2,207,211 + 2.0
2,207,237 + 2.5
2,207,350 + 0.9
2,207,373 - 0.0
2,207,528 + -0.1
2,207,556 - -0.1
2,207,606 - 1.3
2,207,643 - -0.7
2,207,653 - 2.4
2,207,791 + -0.1
2,207,794 - -0.9
2,207,801 - -3.5
2,207,803 + -1.0
2,207,806 - -1.1
2,207,813 + -0.4
2,207,815 - 0.7
2,207,823 + -0.8
2,207,825 - 0.5
2,207,927 - -0.9
2,207,948 + 1.8
2,207,965 - 1.6
2,207,966 + 0.2
2,207,968 - -0.6
2,207,973 + 0.4
2,208,099 - 0.9
2,208,208 - -1.0