Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_725

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1724754 to 1725732 9092 mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1725841 to 1726998 9093 mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202 9094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,724,874 - 9092 mRNA_724 0.12 3.6
1,724,887 + 9092 mRNA_724 0.14 1.3
1,724,984 + 9092 mRNA_724 0.23 0.9
1,724,998 - 9092 mRNA_724 0.25 -0.7
1,725,420 + 9092 mRNA_724 0.68 -0.8
1,726,641 + 9093 mRNA_725 0.69 0.0
1,726,713 - 9093 mRNA_725 0.75 -0.6
1,726,754 - 9093 mRNA_725 0.79 -1.1
1,726,755 + 9093 mRNA_725 0.79 1.2
1,726,756 + 9093 mRNA_725 0.79 0.5
1,726,772 + 9093 mRNA_725 0.80 1.5
1,726,779 + 9093 mRNA_725 0.81 1.6
1,726,928 + 1.4
1,726,936 - 1.4
1,726,952 + -0.2
1,727,060 - 1.9
1,727,063 - 0.1
1,727,064 - 1.2
1,727,075 + 2.6
1,727,077 - 1.1
1,727,078 - 0.2
1,727,207 - -0.9
1,727,645 + -0.4
1,727,648 - -0.2
1,727,659 + -1.3