Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_671

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_670: 9038 - Hypothetical Protein, at 1615101 to 1618146 9038 mRNA_671: 9039 - K03846 ALG9 alpha-1,2-mannosyltransferase, at 1618473 to 1620853 9039 mRNA_672: 9040 - Hypothetical Protein, at 1620917 to 1621557 9040

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,617,812 + 9038 mRNA_670 0.89 1.3
1,617,910 - 2.0
1,618,126 - 0.7
1,618,206 + -0.2
1,618,221 - -2.6
1,618,355 - 0.2
1,618,375 + 0.9
1,618,386 + -1.1
1,618,390 + -0.3
1,618,423 + -1.1
1,618,502 + -0.3
1,618,504 + 0.8
1,618,527 + 1.2
1,618,531 + 0.1
1,618,823 - 9039 mRNA_671 0.15 1.7
1,619,121 + 9039 mRNA_671 0.27 2.1
1,619,543 + 9039 mRNA_671 0.45 -0.6
1,619,561 + 9039 mRNA_671 0.46 -0.4
1,620,439 - 9039 mRNA_671 0.83 2.0
1,620,800 - 1.0
1,621,002 + 9040 mRNA_672 0.13 0.8
1,621,018 - 9040 mRNA_672 0.16 -1.3
1,621,031 - 9040 mRNA_672 0.18 -0.5
1,621,162 - 9040 mRNA_672 0.38 0.9
1,621,757 - 0.6