Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_517

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_516: 8884 - K04482 RAD51 DNA repair protein RAD51, at 1227743 to 1229231 8884 mRNA_517: 8885 - K07508 ACAA2 acetyl-CoA acyltransferase 2, at 1229501 to 1231364 8885 mRNA_518: 8886 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 1231693 to 1233306 8886

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,228,996 + 8884 mRNA_516 0.84 0.5
1,229,885 + 8885 mRNA_517 0.21 -2.3
1,230,070 - 8885 mRNA_517 0.31 -0.2
1,230,369 + 8885 mRNA_517 0.47 0.7
1,230,931 - 8885 mRNA_517 0.77 0.2
1,231,092 + 8885 mRNA_517 0.85 0.7
1,231,229 + 0.7
1,231,243 + -0.2
1,231,344 - 1.4
1,231,355 - 2.3
1,231,362 - 0.9
1,231,385 - -0.2
1,231,387 - 0.3
1,231,505 - 0.3
1,231,512 + 0.3
1,231,514 + 0.8
1,231,514 - -0.5
1,231,516 + 0.1
1,231,517 - 0.4
1,231,527 - -0.9
1,231,528 - -0.4
1,231,543 + 0.4
1,231,552 + -0.3
1,231,981 - 8886 mRNA_518 0.18 1.7
1,232,126 + 8886 mRNA_518 0.27 0.3