Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_465

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_464: 8832 - Hypothetical Protein, at 1077670 to 1079089 8832 mRNA_465: 8833 - K10858 PMS2 DNA mismatch repair protein PMS2, at 1079162 to 1083033 8833 mRNA_466: 8834 - Hypothetical Protein, at 1083366 to 1084523 8834

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,078,541 + 8832 mRNA_464 0.61 0.4
1,078,719 - 8832 mRNA_464 0.74 0.9
1,078,749 + 8832 mRNA_464 0.76 0.1
1,079,318 - 0.4
1,079,338 + 0.9
1,079,494 - 0.3
1,079,603 + 8833 mRNA_465 0.11 0.8
1,080,200 - 8833 mRNA_465 0.27 -0.2
1,080,204 - 8833 mRNA_465 0.27 0.9
1,080,968 + 8833 mRNA_465 0.47 -0.2
1,081,037 - 8833 mRNA_465 0.48 1.2
1,081,221 + 8833 mRNA_465 0.53 -1.2
1,081,301 - 8833 mRNA_465 0.55 0.5
1,081,634 - 8833 mRNA_465 0.64 -1.0
1,081,644 - 8833 mRNA_465 0.64 0.5
1,081,659 - 8833 mRNA_465 0.64 0.0
1,081,779 - 8833 mRNA_465 0.68 0.4
1,081,973 - 8833 mRNA_465 0.73 -0.2
1,082,555 - 8833 mRNA_465 0.88 0.2
1,082,608 + 8833 mRNA_465 0.89 2.6
1,082,633 + 8833 mRNA_465 0.90 -1.4
1,082,787 - 0.3
1,082,796 - 3.3
1,082,799 - -0.1
1,082,804 + -0.1
1,082,837 - 0.6
1,082,954 - 1.3
1,082,955 + 0.7
1,082,958 - 1.5
1,083,402 + 1.6
1,083,499 + 8834 mRNA_466 0.11 0.2
1,083,554 - 8834 mRNA_466 0.16 0.8
1,083,834 - 8834 mRNA_466 0.40 -0.6
1,083,838 + 8834 mRNA_466 0.41 0.5
1,083,967 + 8834 mRNA_466 0.52 0.6