Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_398

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924312 to 925720 8765 mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925990 to 928121 8766 mRNA_399: 8767 - K06874 K06874 zinc finger protein, at 928294 to 930157 8767

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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924,994 + 8765 mRNA_397 0.48 0.3
925,442 - 8765 mRNA_397 0.80 -0.6
925,578 - 8765 mRNA_397 0.90 -1.3
925,853 - 0.1
925,858 - 1.6
925,859 + 0.7
925,875 - 0.9
925,876 - 1.1
925,876 + -0.3
925,883 - 1.0
925,889 + -0.1
925,890 - -0.1
925,995 - 0.2
926,030 - 0.7
926,154 + 1.0
926,167 - -1.4
926,462 + 8766 mRNA_398 0.22 1.0
926,556 + 8766 mRNA_398 0.27 -0.1
926,594 + 8766 mRNA_398 0.28 0.6
926,615 - 8766 mRNA_398 0.29 1.3
926,748 + 8766 mRNA_398 0.36 1.5
926,773 + 8766 mRNA_398 0.37 0.1
927,182 - 8766 mRNA_398 0.56 0.3
927,194 + 8766 mRNA_398 0.56 0.2
927,500 + 8766 mRNA_398 0.71 0.2
928,090 + 0.7
928,105 + -0.2