Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_382

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_381: 8749 - K10415 DYNC1I, DNCI dynein intermediate chain, cytosolic, at 886747 to 889332 8749 mRNA_382: 8750 - Hypothetical Protein, at 889583 to 890268 8750 mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890896 to 891869 8751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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889,568 + -0.3
889,569 + 2.1
889,585 + 0.5
889,673 + 8750 mRNA_382 0.13 0.1
889,876 - 8750 mRNA_382 0.43 0.7
889,981 - 8750 mRNA_382 0.58 0.5
890,134 - 8750 mRNA_382 0.80 -1.1
890,142 + 8750 mRNA_382 0.81 0.9
890,148 + 8750 mRNA_382 0.82 -0.4
890,440 - -0.2
890,443 - 2.4
890,453 - 0.9
890,480 - -2.4
890,605 - -1.3
890,612 + 1.7