Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_362

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_362: 8730 - HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113, at 842601 to 843076 8730 mRNA_363: 8731 - K14776 DDX10, DBP4 ATP-dependent RNA helicase DDX10/DBP4, at 843227 to 846125 8731

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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841,662 + 3.2
841,664 + 2.5
841,678 + 3.1
841,684 + -0.2
841,686 - 1.2
841,704 + 0.3
841,717 - -0.4
841,753 - -0.8
841,754 + 2.3
841,766 - 0.8
841,797 + 1.6
841,797 + 1.6
841,812 + 0.8
841,818 + 2.1
841,818 + 0.1
841,822 - -0.0
842,154 + 0.7
842,301 - 2.3
842,710 - 8730 mRNA_362 0.23 0.5
842,852 - 8730 mRNA_362 0.53 2.2
842,863 + 8730 mRNA_362 0.55 1.0
842,868 + 8730 mRNA_362 0.56 2.0
842,998 - 8730 mRNA_362 0.83 0.3
843,005 + 8730 mRNA_362 0.85 0.8
843,015 - 8730 mRNA_362 0.87 2.6
843,142 - -0.2
843,154 - -0.2
843,160 + -0.5
843,172 + 0.0
843,176 - 0.2
843,183 - 0.2