Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_323

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_322: 8690 - Hypothetical Protein, at 764792 to 765740 8690 mRNA_323: 8691 - Hypothetical Protein, at 766259 to 767210 8691 mRNA_324: 8692 - K00135 gabD succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase, at 767858 to 770027 8692

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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765,286 - 8690 mRNA_322 0.52 -0.2
765,740 + -0.9
766,372 + 8691 mRNA_323 0.12 0.0
766,499 + 8691 mRNA_323 0.25 0.5
766,950 - 8691 mRNA_323 0.73 -1.5
767,067 - 8691 mRNA_323 0.85 -0.8
767,149 - 0.2
767,181 + 1.2
767,238 - -0.8
767,288 - -0.2
767,324 + -0.3
767,333 + 0.3
767,337 + -0.7
767,361 - 0.3
767,411 + -0.9
767,506 - 0.7
767,511 + 1.3
767,530 - 0.5
767,530 - -0.5
767,537 + -0.7
767,538 + -0.1
767,557 + -0.6
767,564 - 0.5
767,577 + 0.7
767,585 + -0.0
767,594 + -0.8
767,603 + -0.1
767,653 - 0.3
767,658 - -0.7
767,664 - -0.3
767,664 - -1.3
767,680 + 0.1
767,685 + -1.8
767,784 + -0.9
767,821 - 0.9
767,823 + -0.5
767,839 + -0.2
767,865 + 2.5
767,964 - -0.2
768,124 + 8692 mRNA_324 0.12 0.5
768,128 + 8692 mRNA_324 0.12 0.9