Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_282

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669704 to 671491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672440 to 673215 8650 mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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671,498 - 1.0
671,498 - 0.9
671,509 - 2.0
671,537 + -1.7
671,561 - 2.4
671,564 + 0.4
671,665 - 0.7
671,674 - 1.0
671,681 + 0.9
671,681 - 1.4
671,694 + 1.1
671,694 + 1.3
671,700 - -0.0
671,704 + 1.7
671,825 + 0.2
671,843 + 1.8
671,845 - -0.0
671,846 - -0.8
671,848 + -0.3
671,850 - 0.2
671,854 + 0.4
671,863 - 1.3
671,866 - 0.5
671,866 + 0.0
671,866 + 0.6
671,867 - 1.3
671,873 + 1.4
671,875 - 0.4
671,875 - -0.4
671,881 + -1.6
671,885 + -0.3
671,886 - 0.5
671,893 - 1.0
671,902 + -1.2
671,920 + 0.2
671,927 + 0.7
671,995 - -0.5
672,003 + -0.5
672,004 - 0.7
672,009 - 0.7
672,018 + 1.9
672,023 - 1.1
672,029 - 0.0
672,029 + -0.5
672,038 - 1.7
672,044 - -0.4
672,044 + -0.7
672,045 + 2.0
672,049 + 0.3
672,058 - -0.0
672,139 - 0.6
672,146 + 0.5
672,164 + -1.7
672,165 - -1.0
672,165 - -0.2
672,169 - 0.9
672,175 - -0.1
672,190 - 0.5
672,276 + 1.1
672,293 - 0.1
672,309 + -2.1
672,320 - 1.0
672,331 + -0.2
672,336 - -1.3
672,357 + -2.0
672,360 + 0.4
672,363 + -1.0
672,372 - -0.1
672,375 + 0.8
672,376 - 0.9
672,379 + 0.4
672,379 + 0.5
672,386 + 1.9
672,395 + -0.3
672,399 + 0.3
672,403 - -1.2
672,430 - -0.2
672,479 + 2.4
672,506 - 0.5
672,529 - 8650 mRNA_282 0.11 -0.9
672,589 + 8650 mRNA_282 0.19 -1.1
672,699 + 8650 mRNA_282 0.33 1.1
672,774 - 8650 mRNA_282 0.43 2.8
672,799 + 8650 mRNA_282 0.46 0.1
672,799 - 8650 mRNA_282 0.46 0.9
672,800 + 8650 mRNA_282 0.46 2.0
672,805 + 8650 mRNA_282 0.47 0.8
672,821 - 8650 mRNA_282 0.49 -0.2
672,824 - 8650 mRNA_282 0.49 1.2
672,827 + 8650 mRNA_282 0.50 -0.7
672,828 + 8650 mRNA_282 0.50 0.0
672,851 + 8650 mRNA_282 0.53 -0.2
672,876 - 8650 mRNA_282 0.56 0.5
672,952 - 8650 mRNA_282 0.66 0.7
673,010 + 8650 mRNA_282 0.73 -1.2
673,014 + 8650 mRNA_282 0.74 -1.5
673,059 - 8650 mRNA_282 0.80 -0.1
673,165 + -0.5
673,215 + -0.5
673,523 + 1.8
673,882 + 0.0