Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_234

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_233: 8601 - K06287 maf septum formation protein, at 575956 to 577138 8601 mRNA_234: 8602 - K00452 HAAO 3-hydroxyanthranilate 3,4-dioxygenase, at 577218 to 578179 8602 mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578724 to 580674 8603

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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576,234 - 8601 mRNA_233 0.23 -0.1
576,244 + 8601 mRNA_233 0.24 0.4
576,244 - 8601 mRNA_233 0.24 -1.0
577,257 + -0.8
577,379 + 8602 mRNA_234 0.17 -1.4
577,982 - 8602 mRNA_234 0.79 -1.9
578,093 - 0.9
578,248 - -0.5
578,250 - -0.7
578,314 + 0.1
578,378 + -0.1
578,379 - -1.4
578,383 - -1.4
578,400 - 0.5
578,543 - 1.1
578,555 - 1.1
579,163 - 8603 mRNA_235 0.23 1.0