Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_230

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_229: 8597 - Hypothetical Protein, at 565794 to 566303 8597 mRNA_230: 8598 - K11254 H4 histone H4, at 566655 to 568496 8598

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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565,827 - -0.8
565,838 - 0.1
566,143 - 8597 mRNA_229 0.68 2.1
566,150 - 8597 mRNA_229 0.70 0.5
566,579 - 1.5
566,713 - -1.5
566,725 - 0.8
566,730 + -0.1
566,852 - 8598 mRNA_230 0.11 -0.1
566,861 - 8598 mRNA_230 0.11 -1.2
566,868 - 8598 mRNA_230 0.12 -0.6
566,877 + 8598 mRNA_230 0.12 -1.4
566,879 + 8598 mRNA_230 0.12 -0.2
566,880 - 8598 mRNA_230 0.12 0.1
566,880 + 8598 mRNA_230 0.12 0.7
566,885 + 8598 mRNA_230 0.12 1.3
566,886 + 8598 mRNA_230 0.13 0.1
566,889 - 8598 mRNA_230 0.13 -0.5
566,894 - 8598 mRNA_230 0.13 -0.4
566,895 + 8598 mRNA_230 0.13 1.9
566,896 + 8598 mRNA_230 0.13 -1.6
566,912 + 8598 mRNA_230 0.14 -0.3
566,947 - 8598 mRNA_230 0.16 0.3
566,998 - 8598 mRNA_230 0.19 0.2
567,051 + 8598 mRNA_230 0.21 -0.1
567,229 - 8598 mRNA_230 0.31 1.5
567,257 - 8598 mRNA_230 0.33 0.3
567,285 - 8598 mRNA_230 0.34 0.2
567,532 + 8598 mRNA_230 0.48 0.8
567,549 + 8598 mRNA_230 0.49 -0.0
567,957 - 8598 mRNA_230 0.71 0.7
568,009 - 8598 mRNA_230 0.74 1.8
568,407 - 0.4
568,655 - -0.0
568,882 + 0.3