Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_226

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070 8593 mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559154 to 560792 8594 mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561039 to 562506 8595

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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558,406 + 8593 mRNA_225 0.68 0.6
558,443 + 8593 mRNA_225 0.70 -0.9
558,954 - 1.4
559,253 - 1.6
559,275 + -0.6
559,300 + 0.5
559,528 - 8594 mRNA_226 0.23 0.2
559,694 + 8594 mRNA_226 0.33 -0.4
559,701 + 8594 mRNA_226 0.33 -0.1
559,855 + 8594 mRNA_226 0.43 0.1
560,129 + 8594 mRNA_226 0.59 0.0
560,425 - 8594 mRNA_226 0.78 -0.0
560,884 - 0.1
561,130 - -1.8
561,429 - 8595 mRNA_227 0.27 -0.3
561,441 + 8595 mRNA_227 0.27 -1.0
561,713 - 8595 mRNA_227 0.46 0.9