Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_214

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_214: 8582 - Hypothetical Protein, at 527992 to 533023 8582 mRNA_215: 8583 - Hypothetical Protein, at 533781 to 534618 8583

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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526,992 - 0.2
526,997 - -0.5
527,004 + 0.5
527,011 + 0.2
527,116 - 0.4
527,587 - 1.3
527,633 + 2.2
527,704 + 1.5
527,878 + -0.3
528,033 - -1.0
528,042 + -0.5
529,058 - 8582 mRNA_214 0.21 0.2
529,201 + 8582 mRNA_214 0.24 1.8
529,491 + 8582 mRNA_214 0.30 0.1
529,590 - 8582 mRNA_214 0.32 0.7
530,040 + 8582 mRNA_214 0.41 -0.1
530,056 + 8582 mRNA_214 0.41 1.9
530,179 + 8582 mRNA_214 0.43 0.3
530,207 - 8582 mRNA_214 0.44 0.3
530,461 - 8582 mRNA_214 0.49 0.5
530,493 - 8582 mRNA_214 0.50 0.5
530,596 + 8582 mRNA_214 0.52 -0.2
530,609 + 8582 mRNA_214 0.52 1.1
530,707 + 8582 mRNA_214 0.54 -0.7
530,716 - 8582 mRNA_214 0.54 1.3
530,766 + 8582 mRNA_214 0.55 0.1
531,034 - 8582 mRNA_214 0.60 1.1
531,045 + 8582 mRNA_214 0.61 0.3
531,057 + 8582 mRNA_214 0.61 1.1
531,067 + 8582 mRNA_214 0.61 0.4
531,080 - 8582 mRNA_214 0.61 0.6
531,089 + 8582 mRNA_214 0.62 0.6
531,193 - 8582 mRNA_214 0.64 1.0
531,271 + 8582 mRNA_214 0.65 -0.1
531,277 + 8582 mRNA_214 0.65 0.3
531,557 - 8582 mRNA_214 0.71 0.5
531,780 + 8582 mRNA_214 0.75 -2.3
531,847 + 8582 mRNA_214 0.77 1.7
531,858 + 8582 mRNA_214 0.77 1.7
532,297 + 8582 mRNA_214 0.86 0.3
532,603 + -0.3
532,751 - -0.1
533,164 + 1.1
533,504 - 0.9
533,524 - 1.2
533,539 - 1.1
533,939 + 8583 mRNA_215 0.19 -1.2