Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_186

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_185: 8553 - K11874 UBP16 ubiquitin carboxyl-terminal hydrolase 16, at 449151 to 451288 8553 mRNA_186: 8554 - Hypothetical Protein, at 451676 to 453998 8554 mRNA_187: 8555 - Hypothetical Protein, at 454535 to 455556 8555

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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451,058 - 8553 mRNA_185 0.89 1.0
451,324 - 0.9
451,326 + -0.5
451,338 + 0.4
451,784 - -0.4
452,527 - 8554 mRNA_186 0.37 -0.2
452,650 - 8554 mRNA_186 0.42 0.9
452,785 - 8554 mRNA_186 0.48 1.5
452,813 + 8554 mRNA_186 0.49 -0.5
452,818 - 8554 mRNA_186 0.49 0.4
452,966 + 8554 mRNA_186 0.56 1.2
453,098 + 8554 mRNA_186 0.61 0.3
453,101 - 8554 mRNA_186 0.61 1.3
453,374 + 8554 mRNA_186 0.73 -0.0
454,108 - 0.9
454,269 - 0.3
454,398 - -1.2
454,414 - 0.3
454,422 - 0.3
454,864 + 8555 mRNA_187 0.32 0.5
454,898 - 8555 mRNA_187 0.36 0.8