Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_165

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_164: 8532 - Hypothetical Protein, at 404595 to 407143 8532 mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407555 to 409013 8533 mRNA_166: 8534 - K07936 RAN GTP-binding nuclear protein Ran, at 409327 to 410564 8534

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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406,735 + 8532 mRNA_164 0.84 -0.2
406,737 + 8532 mRNA_164 0.84 -0.3
406,887 - 8532 mRNA_164 0.90 0.1
407,039 - 3.1
407,178 + 2.1
407,180 + 0.5
407,188 - -0.3
407,490 - 0.5
407,505 - 1.2
407,516 + 0.6
407,652 + 0.3
407,800 + 8533 mRNA_165 0.17 0.4
408,365 - 8533 mRNA_165 0.56 -0.5
408,655 + 8533 mRNA_165 0.75 0.6
408,660 - 8533 mRNA_165 0.76 0.1
408,703 + 8533 mRNA_165 0.79 -0.6
408,787 - 8533 mRNA_165 0.84 0.2
409,102 + 1.6
409,105 + -0.7
409,147 + -0.4