Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8427

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8426: 16794 - Hypothetical Protein, at 1201802 to 1203211 16794 mRNA_8427: 16795 - K11462 EED polycomb protein EED, at 1203788 to 1206558 16795 mRNA_8428: 16796 - KOG3808 Uncharacterized conserved protein, at 1206607 to 1207294 16796 mRNA_8429: 16797 - Hypothetical Protein, at 1207475 to 1209032 16797

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,202,815 - 16794 mRNA_8426 0.72 0.1
1,203,166 - -0.3
1,203,172 + 0.5
1,203,203 + 0.1
1,203,261 - 0.2
1,203,342 + -1.3
1,203,343 + 0.3
1,203,413 - 0.4
1,203,414 + 1.9
1,203,417 - 2.0
1,203,449 - 0.7
1,203,473 + -0.9
1,203,653 - -0.3
1,203,654 - -0.7
1,203,746 - 0.7
1,203,765 - -0.1
1,203,766 + 0.5
1,204,049 - 1.6
1,204,075 + 16795 mRNA_8427 0.10 2.6
1,204,160 - 16795 mRNA_8427 0.13 1.1
1,204,167 + 16795 mRNA_8427 0.14 -0.4
1,204,360 + 16795 mRNA_8427 0.21 -0.2
1,204,421 + 16795 mRNA_8427 0.23 0.9
1,204,818 - 16795 mRNA_8427 0.37 0.0
1,204,926 + 16795 mRNA_8427 0.41 0.7
1,205,051 + 16795 mRNA_8427 0.46 0.6
1,205,164 + 16795 mRNA_8427 0.50 -0.0
1,205,167 - 16795 mRNA_8427 0.50 0.0
1,205,195 - 16795 mRNA_8427 0.51 0.1
1,205,205 - 16795 mRNA_8427 0.51 2.7
1,205,208 + 16795 mRNA_8427 0.51 -0.3
1,205,218 - 16795 mRNA_8427 0.52 1.1
1,205,225 + 16795 mRNA_8427 0.52 -0.8
1,205,228 + 16795 mRNA_8427 0.52 -0.0
1,205,263 + 16795 mRNA_8427 0.53 0.8
1,205,323 + 16795 mRNA_8427 0.55 0.9
1,205,367 - 16795 mRNA_8427 0.57 0.6
1,206,074 - 16795 mRNA_8427 0.82 0.8
1,206,136 - 16795 mRNA_8427 0.85 0.1
1,206,336 - -0.2
1,206,341 - -0.6
1,206,349 - -1.2
1,206,364 + -0.2
1,206,379 - 0.6
1,206,385 - 0.9
1,206,401 + 1.3
1,206,483 + 1.7
1,206,674 + 0.1
1,206,678 - 16796 mRNA_8428 0.10 0.3
1,206,685 + 16796 mRNA_8428 0.11 -0.1
1,207,406 - 0.1
1,207,507 + -0.1
1,207,536 + -0.7