Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8423

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8422: 16790 - K06675 SMC4 structural maintenance of chromosome 4, at 1187443 to 1193584 16790 mRNA_8423: 16791 - SUPERFAMILY--SSF52047, at 1193976 to 1195512 16791 mRNA_8424: 16792 - Hypothetical Protein, at 1195590 to 1195916 16792 mRNA_8425: 16793 - K06674 SMC2 structural maintenance of chromosome 2, at 1196484 to 1200962 16793

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,193,565 - 1.1
1,193,862 - 2.2
1,193,941 - -0.6
1,193,965 - 0.9
1,194,113 - -0.1
1,194,119 + -0.0
1,194,121 - 0.5
1,194,129 + -0.7
1,194,159 - 16791 mRNA_8423 0.12 0.4
1,194,160 + 16791 mRNA_8423 0.12 2.1
1,194,231 - 16791 mRNA_8423 0.17 -1.2
1,194,259 + 16791 mRNA_8423 0.18 -1.0
1,194,385 - 16791 mRNA_8423 0.27 -0.3
1,194,392 - 16791 mRNA_8423 0.27 1.2
1,194,397 - 16791 mRNA_8423 0.27 0.9
1,194,406 + 16791 mRNA_8423 0.28 0.7
1,194,406 + 16791 mRNA_8423 0.28 1.3
1,194,406 + 16791 mRNA_8423 0.28 -0.6
1,194,410 + 16791 mRNA_8423 0.28 0.2
1,194,436 - 16791 mRNA_8423 0.30 1.0
1,194,667 - 16791 mRNA_8423 0.45 1.9
1,194,995 - 16791 mRNA_8423 0.66 -0.9
1,195,175 - 16791 mRNA_8423 0.78 1.6
1,195,180 + 16791 mRNA_8423 0.78 -0.7
1,195,297 - 16791 mRNA_8423 0.86 1.1
1,195,885 - 0.5
1,195,896 + -0.3
1,196,173 - 0.5
1,196,175 - 2.8
1,196,206 - 0.3
1,196,280 - -0.4
1,196,339 - 1.6
1,196,478 + -0.5
1,196,483 + 2.4