Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8366

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8364: 16732 - K01488 add, ADA adenosine deaminase, at 1043494 to 1044920 16732 mRNA_8365: 16733 - Hypothetical Protein, at 1045282 to 1045452 16733 mRNA_8366: 16734 - BLAST similar to An01g09190 [Aspergillus kawachii IFO 4308], at 1045638 to 1046770 16734 mRNA_8367: 16735 - Hypothetical Protein, at 1046951 to 1048222 16735

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,044,761 + 16732 mRNA_8364 0.89 0.1
1,044,764 + 16732 mRNA_8364 0.89 -0.3
1,044,807 - -0.5
1,045,044 - 0.6
1,045,050 - -0.8
1,045,062 - 2.1
1,045,073 - 0.9
1,045,073 + -0.1
1,045,080 + -1.0
1,045,081 - 1.4
1,045,082 + 0.6
1,045,084 - -0.2
1,045,090 + 0.8
1,045,101 - -0.7
1,045,128 + 0.8
1,045,217 - 0.0
1,045,226 + 0.3
1,045,234 - 0.5
1,045,237 + -2.6
1,045,273 + -0.4
1,045,380 + 16733 mRNA_8365 0.57 0.2
1,045,380 + 16733 mRNA_8365 0.57 2.1
1,045,448 + -0.1
1,045,800 - 16734 mRNA_8366 0.14 -0.3
1,045,977 + 16734 mRNA_8366 0.30 -0.5
1,046,385 + 16734 mRNA_8366 0.66 3.4
1,046,824 - 1.8
1,046,839 - 0.6
1,046,850 - 0.0
1,046,852 + -0.0
1,046,865 + 0.0
1,046,922 + -0.3
1,046,973 - -0.6
1,047,021 - 0.2
1,047,029 - 0.3
1,047,177 + 16735 mRNA_8367 0.18 1.0
1,047,197 - 16735 mRNA_8367 0.19 -0.2
1,047,608 + 16735 mRNA_8367 0.52 1.2
1,047,638 - 16735 mRNA_8367 0.54 -0.1
1,047,732 + 16735 mRNA_8367 0.61 0.6